Manual 3.0.2

Table of Contents:

• Introduction
• I. Preliminary data requirements
• II. Installation and getting started
• III. Setting up the properties file
• IV. The CellProfiler Analyst Interface
• V. Classifier
• VI. Table Viewer
• VII. Image Viewer
• VIII. Plate Viewer
• IX. Scatter Plot
• X. Histogram Plot
• XI. Density Plot
• XII. Box Plot
• XIII. Workspaces
• XIV. Image Gallery
• XV. Normalization Tool
• XVI. Dimensionality Reduction
• XVII. FAQ